MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
19428wE1_BL01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 24
bases: 2,837,491 bps
CDS: 2,819
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,888
Total number of protein coding genes annotated/found:
2,819
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5031|JADGMG010000003.1
SEQF5031_01804
Genome Viewer
NA
AA
303/101
3704-4006
hypothetical protein
SEQF5031|JADGMG010000001.1
SEQF5031_00008
Genome Viewer
NA
AA
888/296
3763-4650
Pyridoxal 5'-phosphate synthase subunit PdxS
SEQF5031|JADGMG010000005.1
SEQF5031_02588
Genome Viewer
NA
AA
1374/458
3810-2437
3-isopropylmalate dehydratase large subunit
SEQF5031|JADGMG010000006.1
SEQF5031_02737
Genome Viewer
NA
AA
1470/490
3861-2392
Multidrug export protein EmrB
SEQF5031|JADGMG010000007.1
SEQF5031_02844
Genome Viewer
NA
AA
807/269
4044-4850
hypothetical protein
SEQF5031|JADGMG010000002.1
SEQF5031_01227
Genome Viewer
NA
AA
1692/564
4052-2361
Holliday junction ATP-dependent DNA helicase RuvB
SEQF5031|JADGMG010000006.1
SEQF5031_02738
Genome Viewer
NA
AA
468/156
4399-3932
Multidrug resistance efflux pump SepA
SEQF5031|JADGMG010000001.1
SEQF5031_00009
Genome Viewer
NA
AA
576/192
4652-5227
Pyridoxal 5'-phosphate synthase subunit PdxT
SEQF5031|JADGMG010000002.1
SEQF5031_01228
Genome Viewer
NA
AA
537/179
4658-4122
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02845
Genome Viewer
NA
AA
333/111
4865-5197
Initiation-control protein YabA
SEQF5031|JADGMG010000005.1
SEQF5031_02589
Genome Viewer
NA
AA
1041/347
4866-3826
3-isopropylmalate dehydrogenase
SEQF5031|JADGMG010000003.1
SEQF5031_01805
Genome Viewer
NA
AA
951/317
4985-4035
putative HTH-type transcriptional repressor ExuR
SEQF5031|JADGMG010000003.1
SEQF5031_01806
Genome Viewer
NA
AA
1002/334
5146-6147
Solute-binding protein
SEQF5031|JADGMG010000007.1
SEQF5031_02846
Genome Viewer
NA
AA
729/243
5248-5976
tRNA1(Val) (adenine(37)-N6)-methyltransferase
SEQF5031|JADGMG010000004.1
SEQF5031_02268
Genome Viewer
NA
AA
1803/601
5451-7253
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
SEQF5031|JADGMG010000006.1
SEQF5031_02739
Genome Viewer
NA
AA
1341/447
5772-4432
Multidrug efflux pump SdrM
SEQF5031|JADGMG010000002.1
SEQF5031_01229
Genome Viewer
NA
AA
729/243
5801-5073
HTH-type transcriptional regulator TreR
SEQF5031|JADGMG010000007.1
SEQF5031_02847
Genome Viewer
NA
AA
249/83
5969-6217
hypothetical protein
SEQF5031|JADGMG010000003.1
SEQF5031_01807
Genome Viewer
NA
AA
489/163
6140-6628
Sialic acid TRAP transporter small permease protein SiaQ
SEQF5031|JADGMG010000007.1
SEQF5031_02848
Genome Viewer
NA
AA
843/281
6219-7061
Ribosomal RNA small subunit methyltransferase I
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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